---
- name: phaco.PHA8298.gnm1.ann1.0Q14.annotation_info.txt.gz
  description: Table of gene annotations
  prior_names:
   - Pcoccineus_703_v1.1.annotation_info.txt.gz
- name: phaco.PHA8298.gnm1.ann1.0Q14.cds_primary.fna.gz
  description: CDS sequences - primary only
  prior_names:
   - Pcoccineus_703_v1.1.cds_primaryTranscriptOnly.fa.gz
- name: phaco.PHA8298.gnm1.ann1.0Q14.cds.fna.gz
  description: CDS sequences
  applications:
   - blast
   - mines
  prior_names:
   - Pcoccineus_703_v1.1.cds.fa.gz
- name: phaco.PHA8298.gnm1.ann1.0Q14.defline.txt.gz
  description: Defline for genes
  prior_names:
   - Pcoccineus_703_v1.1.defline.txt.gz
- name: phaco.PHA8298.gnm1.ann1.0Q14.featid_map.tsv.gz
  description: Hash file of old/new gene IDs
- name: phaco.PHA8298.gnm1.ann1.0Q14.gene_models_exons.gff3.gz
  description: Gene models, with exon features
  applications:
   - mines
  prior_names:
   - Pcoccineus_703_v1.1.gene_exons_strip.gff3.gz
- name: phaco.PHA8298.gnm1.ann1.0Q14.gene_models_main.bed.gz
  description: BED-format file, derived from gene_models_main.gff3
  prior_names:
   - Pcoccineus_703_v1.1.gene_strip.gff3.gz
- name: phaco.PHA8298.gnm1.ann1.0Q14.gene_models_main.gff3.gz
  description: Gene models - main
  applications:
   - mines
  prior_names:
   - Pcoccineus_703_v1.1.gene_strip.gff3.gz
- name: phaco.PHA8298.gnm1.ann1.0Q14.iprscan.gff3.gz
  description: InterPro functional information for genes (gff format)
- name: phaco.PHA8298.gnm1.ann1.0Q14.legfed_v1_0.M65K.gfa.tsv.gz
  description: gene family assignments
- name: phaco.PHA8298.gnm1.ann1.0Q14.mrna_primary.fna.gz
  description: Transcript sequences - primary only
  prior_names:
   - Pcoccineus_703_v1.1.transcript_primaryTranscriptOnly.fa.gz
- name: phaco.PHA8298.gnm1.ann1.0Q14.mrna.fna.gz
  description: mrna.fna.gz
  applications:
   - mines
  prior_names:
   - Pcoccineus_703_v1.1.transcript.fa.gz
- name: phaco.PHA8298.gnm1.ann1.0Q14.protein_primary.faa.gz
  description: Protein sequences - primary only
  prior_names:
   - Pcoccineus_703_v1.1.protein_primaryTranscriptOnly.fa.gz
- name: phaco.PHA8298.gnm1.ann1.0Q14.protein.faa.gz
  description: Protein sequences
  applications:
   - blast
   - mines
  prior_names:
   - Pcoccineus_703_v1.1.protein.fa.gz