---
- name: glyma.Wm82.gnm2.div.Zhang_Jiang_2020.info_accessions.txt.gz
  description: Table of Accessions used in this study including VCF ID, PI, Common Name and Species
  prior_names:
    - AnLab_1.5K.SampleIDs.txt
- name: glyma.Wm82.gnm2.div.Zhang_Jiang_2020.nonSyn_SNPs.gtf.gz
  description: List of non-Synonymous SNPs from all 20 chromosomes
  prior_names:
    - AnLab_all_nonSyn_SNPs.gtf.gz
- name: glyma.Wm82.gnm2.div.Zhang_Jiang_2020.NonsynSNPs_provean_freq01.gtf.gz
  description: Nonsynonymous SNPs reported by PROVEAN, with parameters -D=2.5 and allele frequency=0.01
  prior_names:
    - AnLab_1.5K.NS_SNPs_minusd2.5proveanAlleleFreq.01.gtf
- name: glyma.Wm82.gnm2.div.Zhang_Jiang_2020.NonsynSNPs_provean_freq01.vcf.gz
  description: Nonsynonymous SNPs reported by PROVEAN, with parameters -D=2.5 and allele frequency=0.01
  prior_names:
    - AnLab_1.5K.NS_SNPs_minusd2.5proveanAlleleFreq.01.vcf
- name: glyma.Wm82.gnm2.div.Zhang_Jiang_2020.SNPdata_full.vcf.gz
  description: Full VCF file received from Charles An Lab
  prior_names:
    - AnLab_1.5k.vcf.gz
- name: glyma.Wm82.gnm2.div.Zhang_Jiang_2020.SNPdata_maf01.vcf.gz
  description: Original VCF file (SNPData_Full.vcf.gz) filtered for minor allele frequency (MAF) of 1%.
  applications:
    - jbrowse
  prior_names:
    - An_FUll_filtered1.vcf.gz
- name: glyma.Wm82.gnm2.div.Zhang_Jiang_2020.SNPdata_maf05.vcf.gz
  description: Original VCF file (SNPData_Full.vcf.gz) filtered for minor allele frequency (MAF) of 5%.
  prior_names:
    - AnLab_filtered.05.vcf.gz