---
scientific_name: Glycine soja
gene_symbols:
  - GmCHX1
gene_symbol_long: cation/H(+) antiporter 1
gene_model_pub_name: Glysoja01g005509
gene_model_full_id: glyso.PI483463.gnm1.ann1.GlysoPI483463.03G135400
confidence: 4
comments:
  - Gene Glysoja01g005509 is newly sequenced from Glycine soja W05 and is not in the annotation glyso.W05.gnm1.ann1.
  - The newly named gene Glysoja01g005509 has a different format than others in that annotation, which have a dot, e.g. Glysoja.01G001001
  - The gene GmCHX1 is associated with salt tolerance in Glycine soja W05
  - The gene glyso.PI483463.gnm1.ann1.GlysoPI483463.03G135400 has a full-length 100% match with the reported Glysoja01g005509
  - The reported sequence is >KF879911.1 Glycine soja CHX1 mRNA, complete cds
    ATGACGTTCAACGCGAGCACCATCACAACGGCGTCGGAAGGAGCCTGGCAGGGCGATAATCCCCTGAACC
    ACGCTCTTCCTTTGTTGATCGTTCAAACCATCCTCGTAGTCTTCGTGAGCCGCACACTCGCCTTTCTCCT
    CAAACCCTTTCGTCAACCTAAAGTTGTCGCCGAGATTATTGGTGGAATTTTGTTGGGGCCTTCTGCTATT
    GGGCGCAACAAGAAATTCATGCACATAGTGTTCCCAGCATGGAGCACTACCATGCTGGAATCAGTGGCAA
    GCTTCGGCCTCTTATTCTATCTATTTCTGGTGGGCCTAGAGCTCGACTTTCGCACCATTCGCCGGAGCGG
    CAAGCAAGCCTTCAACATCGCGGTGGCCGGAATAACCCTCCCCTTCATCTGCGCCGTGGGAGTAACGTTC
    CTTCTCCAGAGAGCCATCCGCTCTGAAAACCATAACATAGGGTACGTTCAGCACTTCGTGTTCTTAGGGG
    TATCTCTGTCCATCACGGCTTTCCCTGTGCTCGCGCGCATCTTAGCGGAGCTCAAACTGCTGACCACACG
    TGTGGGAGAAACCGCCATGGCGGCTGCAGCCTTCAACGACGTCGCTGCGTGGGTTTTGTTGGCCTTGGCG
    GTGGCTTTGGCTGGCCAGGGACACAAAAGCAGCTTGTTGACATCAATATGGGTGCTCTTCTCAGGGATGG
    CGTTTGTTGCAGCCATGATGATCCTGGTTCGACCGGTGATGAACCGTGTTGCTCGCAAGTGTTCTCACGA
    ACAAGACGTGTTACCCGAAATCTACATATGTTTAACTCTAGCGGGAGTAATGTTATCGGGGTTAGTGACA
    GACATGATAGGGTTACATTCAATTTTCGGGGGATTTGTTTTCGGGCTAACGATACCGAAAGGTGGCGAAT
    TTGCAAATAGAATGACGAGGAGGATTGAGGACTTCGTGTCCACGTTGTTCCTTCCCTTGTACTTTGCTGC
    CAGTGGTTTGAAAACTGACGTGACTAAGTTACGAAGCGTGGTGGATTGGGGGCTTCTTTTGCTGGTTACG
    TCCACCGCGAGCGTGGGGAAGATTTTGGGAACGTTTGCGGTGGCGATGATGTGCATGGTGCCGGTGAGAG
    AATCCTTGACGCTTGGAGTGTTAATGAACACCAAAGGGTTGGTGGAGCTAATCGTTCTCAATATTGGCAG
    AGAGAAGAAGGTGCTTAACGACGAGATGTTTACCATCCTAGTACTCATGGCTCTCTTCACCACCTTCATT
    ACAACTCCAATAGTCTTGGCCATATACAAACCCTCTCGTATAGTAAACTCCGGTTCGCAAAAACCGTCGC
    GGCTAACAGATTTGCAAGAGAAGCTTCGCATTCTTGCGTGCATCCATGGACCTGGCAACATACCCTCACT
    AATCAACTTCGTTGAATCAATTCGGGCCACCAACATGTCACGACTCAAACTCTACGTGATGCAACTTACC
    GAACTCACTGATAGCTCTTCCTCCATCTTGATGGTTCAACGCAGTCGAAAGAATGGTTTTCCCTTCATCA
    ACCGAATGAAGAGTGGACCAATGCATGAGCAAATTGCCACAGCATTCCAGGCTTATGGTGAAGTGGGTAA
    AGTTACTGTGCATCATTTAACATCTATCTCTCTATTGTCAACAATGCACGAGGACATATGCCACGTTGCA
    GAAAAGAAAGGTGTGGCAATGATTATATTGCCCTTCCACAAAAGGTGGGGAGGGGAAGATGAAGAGGTGA
    CAGAAGACTTAGGGCAGGGTTTGAGGGAAGTCAATCAAAGGGTGCTTCAAAATGCAGCCTGCTCTGTCGC
    AGTGCTAGTCAATCGTGGGGTTGCCAGAAGGTACGAACAAGAACCTGAGACAAGTGTTGCTGCAAGGAAA
    AGAGTGTGCATAATTTTCATTGGTGGACCACATGATCGCAAGGTTTTGGAGTTAGGTAGCAGAATGGCAG
    AGCATCCAGCAATTAGGTTGCTTTTAGTGAGATTCACTTCATACACAGAAGTTGGGGACGAGGGACCCAA
    ATATAACTCACCAACATCAACCACCAACTGGGAAAAAGAAAAGGAGTTGGATGAGGAAGCAGTAAACGAG
    TTCAAGGTTAAATGGCAGGAGACTGTGGAGTACATTGAAAAGAACGCAACCAACATAACAGAGGAGGTGT
    TATCAATTGGGAAAGCTAAGGATCACGACCTAGTAATTGTGGGGAAGCAACAACTTGAGACAACCATGTT
    GACAAACATAGATTTTCGTCACGGGAATGAAGAGCTGGGACCCATTGGAGATCTCTTTGTCTCTTCGGGT
    AACGGCATTACCAGTTCATTGCTCGTTATACAGGACCGATATTTTATAAATTCAAACGAAAGTAATCTCG
    TTAAGACATCAAGGGCCGAGAGTACTGTGATTAAAGATGCTATCGAAGAACTTTAA
  - Protein product >AIG92838.1 CHX1 [Glycine soja]
    MTFNASTITTASEGAWQGDNPLNHALPLLIVQTILVVFVSRTLAFLLKPFRQPKVVAEIIGGILLGPSAI
    GRNKKFMHIVFPAWSTTMLESVASFGLLFYLFLVGLELDFRTIRRSGKQAFNIAVAGITLPFICAVGVTF
    LLQRAIRSENHNIGYVQHFVFLGVSLSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVAAWVLLALA
    VALAGQGHKSSLLTSIWVLFSGMAFVAAMMILVRPVMNRVARKCSHEQDVLPEIYICLTLAGVMLSGLVT
    DMIGLHSIFGGFVFGLTIPKGGEFANRMTRRIEDFVSTLFLPLYFAASGLKTDVTKLRSVVDWGLLLLVT
    STASVGKILGTFAVAMMCMVPVRESLTLGVLMNTKGLVELIVLNIGREKKVLNDEMFTILVLMALFTTFI
    TTPIVLAIYKPSRIVNSGSQKPSRLTDLQEKLRILACIHGPGNIPSLINFVESIRATNMSRLKLYVMQLT
    ELTDSSSSILMVQRSRKNGFPFINRMKSGPMHEQIATAFQAYGEVGKVTVHHLTSISLLSTMHEDICHVA
    EKKGVAMIILPFHKRWGGEDEEVTEDLGQGLREVNQRVLQNAACSVAVLVNRGVARRYEQEPETSVAARK
    RVCIIFIGGPHDRKVLELGSRMAEHPAIRLLLVRFTSYTEVGDEGPKYNSPTSTTNWEKEKELDEEAVNE
    FKVKWQETVEYIEKNATNITEEVLSIGKAKDHDLVIVGKQQLETTMLTNIDFRHGNEELGPIGDLFVSSG
    NGITSSLLVIQDRYFINSNESNLVKTSRAESTVIKDAIEEL
curators:
  - Greg Murrell, Steven Cannon
phenotype_summary: Raises salt tolerance.
traits:
  - entity_name: salt tolerance
    entity: TO:0006001
  - relation_name: positively regulates
    relation: RO:0002213
references:
  - citation: Qi, Li et al., 2014
    doi: 10.1038/ncomms5340
    pmid: 25004933