--- scientific_name: Glycine max gene_symbols: - GmSTF3 gene_symbol_long: Soybean TGACG-motif Binding Factor 3 gene_model_pub_name: Glyma.14G088300 gene_model_full_id: glyma.Wm82.gnm2.ann1.Glyma.14G088300 confidence: 5 curators: - Marlene Dorneich-Hayes - Scott Kalberer comments: - Overexpression of STF3 increased nodulation, RNAi knockdown decreased nodulation. - STF3 is induced by the blue light activated transcription factor CRY1 and expressed mainly in leaves. - The protein product of STF3 migrates from shoots to roots. - After migration, it is phosphorylated by calcium/calmodulin dependent protein kinase (CCaMK), which is activated by rhizobial infection. - Phosphorylation causes STF3 and FT2a to form a complex. phenotype_synopsis: STF3 promotes nodulation by inducing expression of nodule signalling pathway 1 (NSP1), nodule inception (NIN), and nuclear factor Y (NFY) genes. traits: - entity_name: regulation of biological process involved in symbiotic interaction entity: GO:0043903 - entity_name: nodulation entity: GO:0009877 - relation_name: positively regulates relation: RO:0002213 - entity_name: positive regulation of lateral root development entity: GO:1901333 references: - citation: Wang, Guo et al., 2021 doi: 10.1126/science.abh2890 pmid: 34591638 - citation: Hasan, Corpas et al., 2022 doi: 10.1016/j.tplants.2022.07.002 pmid: 35840482 - citation: Yang, Lan et al., 2022 doi: 10.1111/jipb.13207 pmid: 34962095 - citation: Kong, Liu et al., 2010 doi: 10.1104/pp.110.160796 pmid: 20864544 - citation: Kong, Nan et al., 2014 doi: 10.2135/cropsci2014.03.0228 pmid: null - citation: Takeshima, Hayashi et al., 2016 doi: 10.1093/jxb/erw283 pmid: 27422993 - citation: Zhao, Takeshima et al., 2016 doi: 10.1186/s12870-016-0704-9 pmid: 26786479 - citation: Dietz, Chan et al., 2023 doi: 10.3389/fpls.2022.889066 pmid: 35574141 - citation: Lin, Liu et al., 2021 doi: 10.1111/jipb.13021 pmid: 33090664 --- scientific_name: Glycine max classical_locus: E9 gene_symbols: - GmFT2a gene_symbol_long: Flowering Locus T2a gene_model_pub_name: Glyma.16G150700 gene_model_full_id: glyma.Wm82.gnm2.ann1.Glyma.16G150700 confidence: 5 curators: - Marlene Dorneich-Hayes - Scott Kalberer comments: - Overexpression of FT2a increased nodulation while RNAi knockdown decreased nodulation. - FT2a is induced by the transcription factors GmCRY1 and CONSTANS. - It is mainly expressed in leaves and migrates from shoots to roots. - In the shoots, the product of FT2a forms a complex with the phosphorylated product of STF3. phenotype_synopsis: FT2a is known for stimulating flowering but it also positivley regulates nodulation. traits: - entity_name: regulation of biological process involved in symbiotic interaction entity: GO:0043903 - entity_name: nodulation entity: GO:0009877 - relation_name: positively regulates relation: RO:0002213 - entity_name: positive regulation of lateral root development entity: GO:1901333 references: - citation: Wang, Guo et al., 2021 doi: 10.1126/science.abh2890 pmid: 34591638 - citation: Hasan, Corpas et al., 2022 doi: 10.1016/j.tplants.2022.07.002 pmid: 35840482 - citation: Yang, Lan et al., 2022 doi: 10.1111/jipb.13207 pmid: 34962095 - citation: Kong, Liu et al., 2010 doi: 10.1104/pp.110.160796 pmid: 20864544 - citation: Kong, Nan et al., 2014 doi: 10.2135/cropsci2014.03.0228 pmid: null - citation: Takeshima, Hayashi et al., 2016 doi: 10.1093/jxb/erw283 pmid: 27422993 - citation: Zhao, Takeshima et al., 2016 doi: 10.1186/s12870-016-0704-9 pmid: 26786479 - citation: Dietz, Chan et al., 2023 doi: 10.3389/fpls.2022.889066 pmid: 35574141 - citation: Lin, Liu et al., 2021 doi: 10.1111/jipb.13021 pmid: 33090664