---
identifier: Lovell.gnm2.TVVK

provenance: "The files in this directory originated from http://phytozome.jgi.doe.gov. The Phytozome repository is considered the primary repository and authoritative; files in this present directory are derived, and may have changes, as noted below. The files here are held as part of the LegumeInfo and SoyBase projects, and are made available here for the purpose of reproducibility of analyses at these sites (e.g. gene family alignments and phylogenies, genome browsers, etc.) and for further use by researchers, as that research extends other analyses at the LegumeInfo and SoyBase projects. If you are conducting research on large-scale data sets for this species, please consider retrieving the data from the primary repositories. If you use the data in the present directory, please respect any usage restrictions in the present and original repositories, and cite the data appropriately."

source: "https://phytozome-next.jgi.doe.gov/info/Ppersica_v2_1"

synopsis: "Prunus persica (peach) accession Lovell, genome assembly 2, by the International Peach Genome Initiative"

scientific_name: Prunus persica

taxid: 3760

scientific_name_abbrev: prupe

genotype: 
  - Lovell

chromosome_prefix: Pp

supercontig_prefix: scaffold

description: "Peach v2.0 was generated from DNA from the doubled haploid cultivar 'Lovell' (PLOV2-2N) which means that the genes and intervening DNA is fixed or identical for all alleles and both chromosomal copies of the genome. This doubled haploid nature has facilitated a highly accurate and consistent assembly of the peach genome. Peach v2.0 currently consists of 8 pseudomolecules representing the 8 chromosomes of peach, and are numbered according to their corresponding linkage groups. The genome sequencing consisted of approximately 8.47 fold whole genome shotgun sequencing employing the accurate Sanger methodology and was assembled using Arachne. See full description at Phytozome/JGI repository (address above)."

bioproject: PRJNA31227

sraproject: 

dataset_doi: 

genbank_accession: AKXU02000000

original_file_creation_date: "2017-02-02"

local_file_creation_date: "2022-11-27"

dataset_release_date: "2022-11-27"

publication_doi: 10.1186/s12864-017-3606-9 

publication_title: "The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity."

contributors: Ignazio Verde, Albert Abbott, Jeremy Schmutz, Michele Morgante, Daniel Rokhsar

citation: "Verde I, Jenkins J, Dondini L, Micali S, Pagliarani G, Vendramin E, Paris R, Aramini V, Gazza L, Rossini L, Bassi D, Troggio M, Shu S, Grimwood J, Tartarini S, Dettori MT, Schmutz J. The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity. BMC Genomics. 2017 Mar 11;18(1):225. doi: 10.1186/s12864-017-3606-9. PMID: 28284188; PMCID: PMC5346207."

data_curators: Steven Cannon

public_access_level: public

license: open

keywords: peach, Lovell, double haploid