---
- name: apiam.LA2127.gnm1_hap2.ann1.NT2R.featid_map.tsv.gz:
  description: Hash file of old/new gene IDs
  prior_names:
   - No prior file
- name: apiam.LA2127.gnm1_hap2.ann1.NT2R.cds.fna.gz:
  description: cds sequences
  prior_names:
   - braker_renamed.CDS.fna.gz
  applications:
   - blast
   - mines
- name: apiam.LA2127.gnm1_hap2.ann1.NT2R.cds_primary.fna.gz:
  description: cds sequences - primary only
  prior_names:
   - braker_renamed.CDS_primary.fna.gz
- name: apiam.LA2127.gnm1_hap2.ann1.NT2R.mrna.fna.gz:
  description: Transcript sequences
  prior_names:
   - braker_renamed.transcripts.fna.gz
  applications:
   - mines
- name: apiam.LA2127.gnm1_hap2.ann1.NT2R.mrna_primary.fna.gz:
  description: Transcript sequences - primary only
  prior_names:
   - braker_renamed.transcripts_primary.fna.gz
- name: apiam.LA2127.gnm1_hap2.ann1.NT2R.protein.faa.gz:
  description: Protein sequences
  prior_names:
   - braker_renamed.protein.faa.gz
  applications:
   - mines
- name: apiam.LA2127.gnm1_hap2.ann1.NT2R.protein_primary.faa.gz:
  description: Protein sequences - primary only
  prior_names:
   - braker_renamed.protein_primary.faa.gz
- name: apiam.LA2127.gnm1_hap2.ann1.NT2R.gene_models_main.gff3.gz:
  description: Gene models - main
  prior_names:
   - braker_renamed.gff3.gz
  applications:
   - mines
   - jbrowse index
- name: apiam.LA2127.gnm1_hap2.ann1.NT2R.gene_models_main.bed.gz:
  description: BED-format file, derived from gene_models_main.gff3
  prior_names:
   - braker_renamed.gff3.gz