---
identifier: IA_panel.gwas.Sandhu_Singh_2020

provenance: "The files in this directory were provided by Dr. Arti Singh and Mr. Kevin Chiteri in December, 2020. Files in this present directory are derived, and may have changes, as noted below. The files here are held as part of the LegumeInfo, SoyBase, and LegumeFederation projects, and are made available here for the purpose of reproducibility of analyses at these sites (e.g. gene family alignments and phylogenies, genome browsers, etc.) and for further use by researchers, as that research extends other analyses at the LegumeInfo, SoyBase, and Legume Federation project(s). If you are conducting research on large-scale data sets for this species, please consider retrieving the data from the primary repositories. If you use the data in the present directory, please 1) please cite the data appropriately - generally referring to the original publications for this data; and if you make use of any significant modifications in the files (noted below under Transformations where applicable), then please also cite the respective database project(s) related to this directory."

synopsis: "Strategies for the utilization of the USDA mung bean germplasm collection for breeding outcomes"

scientific_name: Vigna radiata

taxid: 157791

scientific_name_abbrev: vigra

genotype:
  - 482 USDA Germplasm Collection accessions
  - 17 Asian Vegetable Research and Development Center lines

description: "The complete collection of the USDA mung bean germplasm was screened under Iowa field conditions in 2017, to shortlist 482 accessions to create an Iowamung bean panel. The Iowa mung bean panel was further characterized for field adaptability traits in 2018 and 2019 and genotyped using genotype-by-sequencing (GBS) to conduct associationmapping of important traits. Genetic markers were identified for both quantitative trait (days to flowering [DTF], plant height [PHT], leaf drop atmaturity [LDMS], 100-seed weight [SDWT], and Fusarium wilt score [WS]) and qualitative traits (seed color [SC], seed-coat texture [ST], hypocotyl color [HC], and pod color [PC])."

dataset_doi: 10.5061/dryad.wdbrv15mb

genotyping_platform: Sandhu_Singh_2020

genotyping_method: "Genotyping with the 51,128 single nucleotide polymorphism (SNP) Illumina iSelect BeadArray resulted in 36,346 SNPs that were polymorphic between the eight parents (68.26%)."

original_file_creation_date: "2020-12-01"

local_file_creation_date: "2021-08-01"

publication_doi: 10.1002/csc2.20322

dataset_release_date: "2021-08-01"

publication_title: "Strategies for the utilization of the USDA mung bean germplasm collection for breeding outcomes"

contributors: "Kulbir Sandhu, Kevin Chiteri, Arti Singh"

data_curators: Steven Cannon

public_access_level: public

license: Open

keywords: "mung bean, Vigna radiata"

citation: "Sandhu, K., Singh, A. Strategies for the utilization of the USDA mung bean germplasm collection for breeding outcomes. Crop Science 2020"