identifier: VC1973A.gnm7.div.Sandhu_Singh_2020
  
provenance: "The files in this directory were derived from a combination of the variant file in collection VC1973A.gnm6.div.Sandhu_Singh_2020 and the genome assembly in collection VC1973A.gnm7.SB53. Files in this present directory are derived, and may have changes, as noted below. The files here are held as part of the LegumeInfo and SoyBase projects, and are made available here for the purpose of reproducibility of analyses at these sites (e.g. gene family alignments and phylogenies, genome browsers, etc.) and for further use by researchers, as that research extends other analyses at the LegumeInfo and SoyBase projects. If you are conducting research on large-scale data sets for this species, please consider retrieving the data from the primary repositories. If you use the data in the present directory, please 1) please cite the data appropriately - generally referring to the original publications for this data; and if you make use of any significant modifications in the files (noted below under Transformations where applicable), then please also cite the respective database project(s) related to this directory."

synopsis: "Genetic variants for Vigna radiata, assessed across 500 accessions to create the Iowamung bean panel; genotyped relative to accession VC1973A.gnm7"

related_to: VC1973A.gnm7.SB53

scientific_name: Vigna radiata

taxid: 157791

bioproject: 

scientific_name_abbrev: vigra

genotype: 
  - "482 accessions from the USDA germplasm collection selected for adaptation to midwestern U.S. growing conditions, and 17 lines consisting of commercial varieties and improved germplasm obtained from the Asian Vegetable Research and Development Center, Taiwan."

description: "The complete collection of the USDA mung bean germplasm was screened under Iowa field conditions in 2017, to shortlist 482 accessions to create an Iowamung bean panel." 

dataset_doi: 10.5061/dryad.wdbrv15mb

genbank_accession: 

genotyping_platform: GBS

genotyping_method: "Genotyping with the 51,128 single nucleotide polymorphism (SNP) Illumina iSelect BeadArray resulted in 36,346 SNPs that were polymorphic between the eight parents (68.26%)."

original_file_creation_date: "2022-12-21"

local_file_creation_date: "2022-12-21"

publication_doi: 10.1111/tpj.13827

dataset_release_date: "2022-12-21"

publication_title: "Strategies for the utilization of the USDA mung bean germplasm collection for breeding outcomes"

contributors: "Kulbir Sandhu, Kevin Chiteri, Arti Singh, Steven Cannon"

data_curators: Steven Cannon

public_access_level: public

license: Open

keywords: mung bean, Vigna radiata

citation: "Sandhu, K., Singh, A. Strategies for the utilization of the USDA mung bean germplasm collection for breeding outcomes. Crop Science 2020"