---
identifier: ICABunsi_x_SXB405.gen.Parker_BernyMierYTeran_2020

genetic_map: Stampede_x_RedHawk_F2_a

synopsis: "Pod Dehiscence QTLs were identified using three phenotyping methods and an ICA Bunsi (PD-susceptible) x SXB 405 (PD-resistant) recombinant inbred mapping population." 

scientific_name: Phaseolus vulgaris

taxid: 3885

bioproject: none

scientific_name_abbrev: phavu

genotype:
  - ICABunsi x SXB405

description: "Pod Dehiscence QTLs were identified using three phenotyping methods and an ICA Bunsi (PD-susceptible) x SXB 405 (PD-resistant) recombinant inbred mapping population.  An unreplicated spring planting of 238 RIL field plots were visually evaluated for dehiscence.  A replicated summer planting produced mature, non-dehiscing pods from 191 RILs that were phenotyped in two ways: the proportion of pods dehiscing after 7 days in a 65 C dessicator and 7 subsequent days at room temperature, and peak force required to induce pod fracture at the apical end of the pod beak measured with an Imada force measurement guage.  Composite interval mapping was completed with the R package R/qtl." 

publication_doi: 10.1111/nph.16164

publication_title: "Pod indehiscence is a domestication and aridity resilience trait in common bean" 

contributors: "Parker, Travis A; Berny Mier y Teran, Jorge C; Palkovic, Antonia; Jernstedt, Judy; Gepts, Paul"

data_curators: Steven Cannon, Sam Hokin

public_access_level: public

license: Open

citation: "Parker, T. A., Berny Mier Y Teran, J. C., Palkovic, A., Jernstedt, J. & Gepts, P. Pod indehiscence is a domestication and aridity resilience trait in common bean. New Phytol. 225, 558–570 (2020)"

genotyping_platform: BARCBean6K

genotyping_method: "Genomic DNA was extracted from parents and RILs using a modified CTAB method and DNA quality assessed with a NanoDrop spectrophotometer."