---
identifier: 5-593.gnm1.ann1.3FBJ

provenance: "The files in this directory originated from phytozome-next.jgi.doe.gov. The Phytozome repository is considered the primary repository and authoritative; files in this present directory are derived, and may have changes, as noted below. The files here are held as part of the LegumeInfo, PeanutBase, and LegumeFederation projects, and are made available here for the purpose of reproducibility of analyses at these sites (e.g. gene family alignments and phylogenies, genome browsers, etc.) and for further use by researchers, as that research extends other analyses at the LegumeInfo, PeanutBase, and Legume Federation project(s). If you are conducting research on large-scale data sets for this species, please consider retrieving the data from the primary repositories. If you use the data in the present directory, please 1) please cite the data appropriately - generally referring to the original publications for this data; and if you make use of any significant modifications in the files (noted below under Transformations where applicable), then please also cite the respective database project(s) related to this directory."

source: "https://phytozome-next.jgi.doe.gov/info/Pvulgaris5_593_v1_1"

synopsis: "Phaseolus vulgaris accession 5-593 (Middle American race), annotation 1, genome assembly v1."

scientific_name: Phaseolus vulgaris

taxid: 3885

scientific_name_abbrev: phavu

genotype:
 - 5-593

description: "[description from Dr. Phil McClean] Accession 5-593 was developed by Dr. Mark Bassett at the University of Florida. 5-593 traces back to B-351, a black-seeded variety developed by Dr. Jim Beaver, University of Puerto Rico from the cross of the Middle American varieties Bonita (white-seeded) and Jamapa (black-seeded). Dr. Bassett irradiated B-351, selected a line with determinate growth habit, back-crossed the selected line to B-351, and selected the plant with best determinate growth habit in the F2 and F3 generations. The best segregant in the F3 generation was designated 5-593. 5-593 was initially obtained from the USDA National Plant Germplasm System (NPGS; aka GRIN) as PI 608674. Dr. Bassett used 5-593 as the recipient parent to introgress many genes for seed coat color and pattern, flower color, and other morphological traits typically to the backcross three generation. These introgression lines are also available from the USDA NPGS."

publication_doi: 10.1093/nar/gkr944

original_file_creation_date: "2021-12-01"

local_file_creation_date: "2022-01-10"

dataset_release_date: "2022-10-10"

contributors: "Phil McClean, Jeremy Schmutz"

data_curators: "Andrew Farmer, Steven Cannon"

public_access_level: public

license: open 

keywords: Middle American race, common bean