--- file_transformation: - Prefix IDs with phaac.W6_15578.gnm2.ann1. changes: - 2022-01-10 initial repository creation - 2023-02-19 scannon To fix incongruence between "primary" transcripts in CDS and proteins, I made the following changes: Re-extract the cds, mrna, and protein files using gffread; then extract the "primary" subsets for each.