---
file_transformation:
  - Prefix IDs with phaac.Frijol_Bayo.gnm1.ann1.
  - Removed .p suffix from protein IDs.

changes:
  - 2022-01-10 initial repository creation
  - 2023-02-19 scannon To fix incongruence between "primary" transcripts in CDS and proteins, I made the following changes:
     Re-extract the cds, mrna, and protein files using gffread; then extract the "primary" subsets for each.

  - 2025-04-16 adf: add phaac.Frijol_Bayo.gnm1.ann1.ML22.legume.fam3.VLMQ.gfa.tsv.gz