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# filename in this repository: description
lupan.Tanjil.gnm1.ann1.nnV9.cds.fna: CDS seqs, with coordinates within scaffolds **
lupan.Tanjil.gnm1.ann1.nnV9.genes_all.gff3: GFF for all gene models
lupan.Tanjil.gnm1.ann1.nnV9.genes_in_pchr.gff3: GFF for genes within pseudomolecules
lupan.Tanjil.gnm1.ann1.nnV9.genes_pchr_plus_scaff.gff3: GFF for all gene-models   ** Preferred "plain" version
lupan.Tanjil.gnm1.ann1.nnV9.miRNA_all.gff3: GFF for miRNAs
lupan.Tanjil.gnm1.ann1.nnV9.protein.faa: protein seqs, with coordinates within scaffolds **
lupan.Tanjil.gnm1.ann1.nnV9.rRNA_all.gff3: GFF for rRNAs
lupan.Tanjil.gnm1.ann1.nnV9.scaffolds_in_pchr.gff3: GFF for scaffolds-within-pseudomolecules
lupan.Tanjil.gnm1.ann1.nnV9.snRNA_all.gff3: GFF for snRNAs
lupan.Tanjil.gnm1.ann1.nnV9.tRNA_all.gff3: GFF for tRNAs
lupan.Tanjil.gnm1.ann1.nnV9.legfed_v1_0.M65K.gfa.tsv.gz: gene family assignments