--- file_transformation: - added prefix "Lj to >lotja.MG20.gnm3.ann1." to IDs in all files changes: - 2018-07-14 fixed key names: QPGB --> WF9B - 2018-09-15 fixing of fasta header prefixing, renaming of ffn to fna, other places where key names incorrect - 2020-10-19 added primaryTranscript files, using longest_isoform on proteins, then choosing the same splice variant for cds and transcript (extracting by sequence id using samtools faidx); renamed cDNA to transcript to be consistent with naming convention used elsewhere. added gene family assignment files - 2021-07-30 adf: a set of 298 CDS had coordinates outside their parental mRNA and gene. In this case all were on the reverse strand, so adding 1bp to the start coordinate (effectively trimming the CDS by 1 bp at the end) seemed like the most appropriate solution; diffs from prior state in changes_to_CDS_for_issue_43. Fixes https://github.com/legumeinfo/datastore-issues/issues/43. - 2021-07-30 adf: altered Name attributes when duplicated to enable intermine load using script /usr/local/www/data/about_the_data_store/scripts/ensure_name_uniqueness.pl; fixes https://github.com/legumeinfo/datastore-issues/issues/52 - 2021-07-30 adf: further altered gene Name attributes, so that they are just the stripped down version of the IDs instead of cufflinks-derived and assorted other strings. Fixes https://github.com/legumeinfo/datastore-issues/issues/53 :g/ID=lotja.MG20.gnm3.ann1.\([^;]*\);Name=[^;]*/s//ID=lotja.MG20.gnm3.ann1.\1;Name=\1 - 2021-12-30 sc: merged text from file renaming_for_issue_52 into this one (below) Removed file renaming_for_issue_52.diffs renaming_for_issue_52: known_Npl seen 1 times already, renaming to known_Npl:2 known_Npl seen 2 times already, renaming to known_Npl:3 known_Npl seen 3 times already, renaming to known_Npl:4 known_Npl seen 4 times already, renaming to known_Npl:5 known_Npl seen 5 times already, renaming to known_Npl:6 known_Npl seen 6 times already, renaming to known_Npl:7 known_Npl seen 7 times already, renaming to known_Npl:8 known_Npl seen 8 times already, renaming to known_Npl:9 known_Nup85 seen 1 times already, renaming to known_Nup85:2 known_Nup85 seen 2 times already, renaming to known_Nup85:3 known_Nup85 seen 3 times already, renaming to known_Nup85:4 known_Nup85 seen 4 times already, renaming to known_Nup85:5 known_Nup85 seen 5 times already, renaming to known_Nup85:6 known_Nup85 seen 6 times already, renaming to known_Nup85:7 known_Nup85 seen 7 times already, renaming to known_Nup85:8 known_Nup85 seen 8 times already, renaming to known_Nup85:9 known_Nup85 seen 9 times already, renaming to known_Nup85:10 known_Nup85 seen 10 times already, renaming to known_Nup85:11 known_Nup85 seen 11 times already, renaming to known_Nup85:12 known_Nup85 seen 12 times already, renaming to known_Nup85:13 known_Nup85 seen 13 times already, renaming to known_Nup85:14 known_Nup85 seen 14 times already, renaming to known_Nup85:15 known_Nup85 seen 15 times already, renaming to known_Nup85:16 known_Nup85 seen 16 times already, renaming to known_Nup85:17 known_Nup85 seen 17 times already, renaming to known_Nup85:18 known_Nup85 seen 18 times already, renaming to known_Nup85:19 known_Nup85 seen 19 times already, renaming to known_Nup85:20 known_Nup85 seen 20 times already, renaming to known_Nup85:21 known_Nup85 seen 21 times already, renaming to known_Nup85:22 known_Nup85 seen 22 times already, renaming to known_Nup85:23 known_Nup85 seen 23 times already, renaming to known_Nup85:24 known_Nup85 seen 24 times already, renaming to known_Nup85:25 known_Nup85 seen 25 times already, renaming to known_Nup85:26 known_Nup85 seen 26 times already, renaming to known_Nup85:27 known_Nup85 seen 27 times already, renaming to known_Nup85:28 known_Nup85 seen 28 times already, renaming to known_Nup85:29 known_Nup85 seen 29 times already, renaming to known_Nup85:30 known_Nup85 seen 30 times already, renaming to known_Nup85:31 known_Nup85 seen 31 times already, renaming to known_Nup85:32 known_Nup85 seen 32 times already, renaming to known_Nup85:33 known_Nup85 seen 33 times already, renaming to known_Nup85:34 known_Nup85 seen 34 times already, renaming to known_Nup85:35 known_Nup85 seen 35 times already, renaming to known_Nup85:36 known_Nup85 seen 36 times already, renaming to known_Nup85:37 known_Nup85 seen 37 times already, renaming to known_Nup85:38 known_Nsp2 seen 1 times already, renaming to known_Nsp2:2 known_Nsp2 seen 2 times already, renaming to known_Nsp2:3 known_Nsp2 seen 3 times already, renaming to known_Nsp2:4 known_Clv2 seen 1 times already, renaming to known_Clv2:2 known_Clv2 seen 2 times already, renaming to known_Clv2:3 known_Clv2 seen 3 times already, renaming to known_Clv2:4 known_Klavier seen 1 times already, renaming to known_Klavier:2 known_Klavier seen 2 times already, renaming to known_Klavier:3 known_Klavier seen 3 times already, renaming to known_Klavier:4 known_Pir seen 1 times already, renaming to known_Pir:2 known_Pir seen 2 times already, renaming to known_Pir:3 known_Pir seen 3 times already, renaming to known_Pir:4 known_Pir seen 4 times already, renaming to known_Pir:5 known_Pir seen 5 times already, renaming to known_Pir:6 known_Pir seen 6 times already, renaming to known_Pir:7 known_Pir seen 7 times already, renaming to known_Pir:8 known_Pir seen 8 times already, renaming to known_Pir:9 known_Pir seen 9 times already, renaming to known_Pir:10 known_Pir seen 10 times already, renaming to known_Pir:11 known_Pir seen 11 times already, renaming to known_Pir:12 known_Pir seen 12 times already, renaming to known_Pir:13 known_Pir seen 13 times already, renaming to known_Pir:14 known_Pir seen 14 times already, renaming to known_Pir:15 known_Pir seen 15 times already, renaming to known_Pir:16 known_Pir seen 16 times already, renaming to known_Pir:17 known_Pir seen 17 times already, renaming to known_Pir:18 known_Pir seen 18 times already, renaming to known_Pir:19 known_Pir seen 19 times already, renaming to known_Pir:20 known_Pir seen 20 times already, renaming to known_Pir:21 known_Pir seen 21 times already, renaming to known_Pir:22 known_Pir seen 22 times already, renaming to known_Pir:23 known_Pir seen 23 times already, renaming to known_Pir:24 known_Pir seen 24 times already, renaming to known_Pir:25 known_Pir seen 25 times already, renaming to known_Pir:26 known_Pir seen 26 times already, renaming to known_Pir:27 known_Pir seen 27 times already, renaming to known_Pir:28 known_Pir seen 28 times already, renaming to known_Pir:29 known_Pir seen 29 times already, renaming to known_Pir:30 known_Pir seen 30 times already, renaming to known_Pir:31 known_Pir seen 31 times already, renaming to known_Pir:32 known_Pir seen 32 times already, renaming to known_Pir:33 known_Pir seen 33 times already, renaming to known_Pir:34 known_Pir seen 34 times already, renaming to known_Pir:35 known_Pir seen 35 times already, renaming to known_Pir:36 known_Pir seen 36 times already, renaming to known_Pir:37 known_Pir seen 37 times already, renaming to known_Pir:38 known_Pir seen 38 times already, renaming to known_Pir:39 known_Pir seen 39 times already, renaming to known_Pir:40 known_Pir seen 40 times already, renaming to known_Pir:41 known_Pir seen 41 times already, renaming to known_Pir:42 known_Pir seen 42 times already, renaming to known_Pir:43 known_Pir seen 43 times already, renaming to known_Pir:44 known_Pir seen 44 times already, renaming to known_Pir:45 known_Pir seen 45 times already, renaming to known_Pir:46 known_Pir seen 46 times already, renaming to known_Pir:47 known_Pir seen 47 times already, renaming to known_Pir:48 known_Pir seen 48 times already, renaming to known_Pir:49 known_Pir seen 49 times already, renaming to known_Pir:50 known_Pir seen 50 times already, renaming to known_Pir:51 known_Pir seen 51 times already, renaming to known_Pir:52 known_Pir seen 52 times already, renaming to known_Pir:53 known_Pir seen 53 times already, renaming to known_Pir:54 known_Pir seen 54 times already, renaming to known_Pir:55 known_Pir seen 55 times already, renaming to known_Pir:56 known_Pir seen 56 times already, renaming to known_Pir:57 known_Pir seen 57 times already, renaming to known_Pir:58 known_Pir seen 58 times already, renaming to known_Pir:59 known_Pir seen 59 times already, renaming to known_Pir:60 known_Pir seen 60 times already, renaming to known_Pir:61 known_Pir seen 61 times already, renaming to known_Pir:62 known_Castor seen 1 times already, renaming to known_Castor:2 known_Castor seen 2 times already, renaming to known_Castor:3 known_Castor seen 3 times already, renaming to known_Castor:4 known_Castor seen 4 times already, renaming to known_Castor:5 known_Castor seen 5 times already, renaming to known_Castor:6 known_Castor seen 6 times already, renaming to known_Castor:7 known_Castor seen 7 times already, renaming to known_Castor:8 known_Castor seen 8 times already, renaming to known_Castor:9 known_Castor seen 9 times already, renaming to known_Castor:10 known_Castor seen 10 times already, renaming to known_Castor:11 known_Castor seen 11 times already, renaming to known_Castor:12 known_Castor seen 12 times already, renaming to known_Castor:13 known_Castor seen 13 times already, renaming to known_Castor:14 known_Castor seen 14 times already, renaming to known_Castor:15 known_Castor seen 15 times already, renaming to known_Castor:16 known_Castor seen 16 times already, renaming to known_Castor:17 known_Castor seen 17 times already, renaming to known_Castor:18 known_Castor seen 18 times already, renaming to known_Castor:19 known_Castor seen 19 times already, renaming to known_Castor:20 known_Castor seen 20 times already, renaming to known_Castor:21 known_Castor seen 21 times already, renaming to known_Castor:22 known_Castor seen 22 times already, renaming to known_Castor:23 known_Castor seen 23 times already, renaming to known_Castor:24 known_Castor seen 24 times already, renaming to known_Castor:25 known_Castor seen 25 times already, renaming to known_Castor:26 known_Sst1 seen 1 times already, renaming to known_Sst1:2 known_Sst1 seen 2 times already, renaming to known_Sst1:3 known_Sst1 seen 3 times already, renaming to known_Sst1:4 known_Sst1 seen 4 times already, renaming to known_Sst1:5 known_Sst1 seen 5 times already, renaming to known_Sst1:6 known_Sst1 seen 6 times already, renaming to known_Sst1:7 known_Sst1 seen 7 times already, renaming to known_Sst1:8 known_Sst1 seen 8 times already, renaming to known_Sst1:9 known_Sst1 seen 9 times already, renaming to known_Sst1:10 known_Sst1 seen 10 times already, renaming to known_Sst1:11 known_Sst1 seen 11 times already, renaming to known_Sst1:12 known_Sst1 seen 12 times already, renaming to known_Sst1:13 known_Sst1 seen 13 times already, renaming to known_Sst1:14 known_Sst1 seen 14 times already, renaming to known_Sst1:15 known_Sst1 seen 15 times already, renaming to known_Sst1:16 known_Sst1 seen 16 times already, renaming to known_Sst1:17 known_Sst1 seen 17 times already, renaming to known_Sst1:18 known_Sst1 seen 18 times already, renaming to known_Sst1:19 known_Sst1 seen 19 times already, renaming to known_Sst1:20 known_Sst1 seen 20 times already, renaming to known_Sst1:21 known_Sst1 seen 21 times already, renaming to known_Sst1:22 known_Sst1 seen 22 times already, renaming to known_Sst1:23 known_Sst1 seen 23 times already, renaming to known_Sst1:24 known_Sst1 seen 24 times already, renaming to known_Sst1:25 known_Sst1 seen 25 times already, renaming to known_Sst1:26 known_Sst1 seen 26 times already, renaming to known_Sst1:27 known_SymRK seen 1 times already, renaming to known_SymRK:2 known_SymRK seen 2 times already, renaming to known_SymRK:3 known_SymRK seen 3 times already, renaming to known_SymRK:4 known_SymRK seen 4 times already, renaming to known_SymRK:5 known_SymRK seen 5 times already, renaming to known_SymRK:6 known_SymRK seen 6 times already, renaming to known_SymRK:7 known_SymRK seen 7 times already, renaming to known_SymRK:8 known_SymRK seen 8 times already, renaming to known_SymRK:9 known_SymRK seen 9 times already, renaming to known_SymRK:10 known_SymRK seen 10 times already, renaming to known_SymRK:11 known_SymRK seen 11 times already, renaming to known_SymRK:12 known_SymRK seen 12 times already, renaming to known_SymRK:13 known_SymRK seen 13 times already, renaming to known_SymRK:14 known_SymRK seen 14 times already, renaming to known_SymRK:15 known_SymRK seen 15 times already, renaming to known_SymRK:16 known_SymRK seen 16 times already, renaming to known_SymRK:17 known_SymRK seen 17 times already, renaming to known_SymRK:18 known_SymRK seen 18 times already, renaming to known_SymRK:19 known_SymRK seen 19 times already, renaming to known_SymRK:20 known_SymRK seen 20 times already, renaming to known_SymRK:21 known_SymRK seen 21 times already, renaming to known_SymRK:22 known_SymRK seen 22 times already, renaming to known_SymRK:23 known_SymRK seen 23 times already, renaming to known_SymRK:24 known_SymRK seen 24 times already, renaming to known_SymRK:25 known_SymRK seen 25 times already, renaming to known_SymRK:26 known_SymRK seen 26 times already, renaming to known_SymRK:27 known_SymRK seen 27 times already, renaming to known_SymRK:28 known_SymRK seen 28 times already, renaming to known_SymRK:29 known_SymRK seen 29 times already, renaming to known_SymRK:30 known_SymRK seen 30 times already, renaming to known_SymRK:31 known_SymRK seen 31 times already, renaming to known_SymRK:32 known_Cyclops seen 1 times already, renaming to known_Cyclops:2 known_Cyclops seen 2 times already, renaming to known_Cyclops:3 known_Cyclops seen 3 times already, renaming to known_Cyclops:4 known_Cyclops seen 4 times already, renaming to known_Cyclops:5 known_Cyclops seen 5 times already, renaming to known_Cyclops:6 known_Cyclops seen 6 times already, renaming to known_Cyclops:7 known_Cyclops seen 7 times already, renaming to known_Cyclops:8 known_Cyclops seen 8 times already, renaming to known_Cyclops:9 known_Cyclops seen 9 times already, renaming to known_Cyclops:10 known_Cyclops seen 10 times already, renaming to known_Cyclops:11 known_Cyclops seen 11 times already, renaming to known_Cyclops:12 known_Cyclops seen 12 times already, renaming to known_Cyclops:13 known_Cyclops seen 13 times already, renaming to known_Cyclops:14 known_Cyclops seen 14 times already, renaming to known_Cyclops:15 known_Cyclops seen 15 times already, renaming to known_Cyclops:16 known_Cyclops seen 16 times already, renaming to known_Cyclops:17 known_Cyclops seen 17 times already, renaming to known_Cyclops:18 known_Cyclops seen 18 times already, renaming to known_Cyclops:19 known_Cyclops seen 19 times already, renaming to known_Cyclops:20 known_Cyclops seen 20 times already, renaming to known_Cyclops:21 known_Cyclops seen 21 times already, renaming to known_Cyclops:22 known_Cyclops seen 22 times already, renaming to known_Cyclops:23 known_Cyclops seen 23 times already, renaming to known_Cyclops:24 known_Nfr5 seen 1 times already, renaming to known_Nfr5:2 known_Nfr5 seen 2 times already, renaming to known_Nfr5:3 known_Nfr5 seen 3 times already, renaming to known_Nfr5:4 known_Nena seen 1 times already, renaming to known_Nena:2 known_Nena seen 2 times already, renaming to known_Nena:3 known_Nena seen 3 times already, renaming to known_Nena:4 known_Nena seen 4 times already, renaming to known_Nena:5 known_Nena seen 5 times already, renaming to known_Nena:6 known_Nena seen 6 times already, renaming to known_Nena:7 known_Nena seen 7 times already, renaming to known_Nena:8 known_Nena seen 8 times already, renaming to known_Nena:9 known_Nena seen 9 times already, renaming to known_Nena:10 known_Nena seen 10 times already, renaming to known_Nena:11 known_Nena seen 11 times already, renaming to known_Nena:12 known_Nena seen 12 times already, renaming to known_Nena:13 known_Nena seen 13 times already, renaming to known_Nena:14 known_Nena seen 14 times already, renaming to known_Nena:15 known_Nena seen 15 times already, renaming to known_Nena:16 known_Nfr1b seen 1 times already, renaming to known_Nfr1b:2 known_Nfr1b seen 2 times already, renaming to known_Nfr1b:3 known_Nfr1b seen 3 times already, renaming to known_Nfr1b:4 known_Nfr1b seen 4 times already, renaming to known_Nfr1b:5 known_Nfr1b seen 5 times already, renaming to known_Nfr1b:6 known_Nfr1b seen 6 times already, renaming to known_Nfr1b:7 known_Nfr1b seen 7 times already, renaming to known_Nfr1b:8 known_Nfr1b seen 8 times already, renaming to known_Nfr1b:9 known_Nfr1b seen 9 times already, renaming to known_Nfr1b:10 known_Nfr1b seen 10 times already, renaming to known_Nfr1b:11 known_Nfr1b seen 11 times already, renaming to known_Nfr1b:12 known_Nfr1b seen 12 times already, renaming to known_Nfr1b:13 known_Nfr1b seen 13 times already, renaming to known_Nfr1b:14 known_Nfr1b seen 14 times already, renaming to known_Nfr1b:15 known_Nfr1b seen 15 times already, renaming to known_Nfr1b:16 known_Nfr1b seen 16 times already, renaming to known_Nfr1b:17 known_Nfr1b seen 17 times already, renaming to known_Nfr1b:18 known_Nfr1b seen 18 times already, renaming to known_Nfr1b:19 known_Nfr1b seen 19 times already, renaming to known_Nfr1b:20 known_Nfr1b seen 20 times already, renaming to known_Nfr1b:21 known_Nfr1b seen 21 times already, renaming to known_Nfr1b:22 known_Nfr1b seen 22 times already, renaming to known_Nfr1b:23 known_Nfr1b seen 23 times already, renaming to known_Nfr1b:24 known_Nfr1b seen 24 times already, renaming to known_Nfr1b:25 known_Nfr1b seen 25 times already, renaming to known_Nfr1b:26 known_Nup133 seen 1 times already, renaming to known_Nup133:2 known_Nup133 seen 2 times already, renaming to known_Nup133:3 known_Nup133 seen 3 times already, renaming to known_Nup133:4 known_Nup133 seen 4 times already, renaming to known_Nup133:5 known_Nup133 seen 5 times already, renaming to known_Nup133:6 known_Nup133 seen 6 times already, renaming to known_Nup133:7 known_Nup133 seen 7 times already, renaming to known_Nup133:8 known_Nup133 seen 8 times already, renaming to known_Nup133:9 known_Nup133 seen 9 times already, renaming to known_Nup133:10 known_Nup133 seen 10 times already, renaming to known_Nup133:11 known_Nup133 seen 11 times already, renaming to known_Nup133:12 known_Nup133 seen 12 times already, renaming to known_Nup133:13 known_Nup133 seen 13 times already, renaming to known_Nup133:14 known_Nup133 seen 14 times already, renaming to known_Nup133:15 known_Nup133 seen 15 times already, renaming to known_Nup133:16 known_Nup133 seen 16 times already, renaming to known_Nup133:17 known_Nup133 seen 17 times already, renaming to known_Nup133:18 known_Nin seen 1 times already, renaming to known_Nin:2 known_Nin seen 2 times already, renaming to known_Nin:3 known_Nin seen 3 times already, renaming to known_Nin:4 known_Nin seen 4 times already, renaming to known_Nin:5 known_Nin seen 5 times already, renaming to known_Nin:6 known_Nin seen 6 times already, renaming to known_Nin:7 known_Nin seen 7 times already, renaming to known_Nin:8 known_Nin seen 8 times already, renaming to known_Nin:9 known_Nin seen 9 times already, renaming to known_Nin:10 known_Nin seen 10 times already, renaming to known_Nin:11 known_CCaMK seen 1 times already, renaming to known_CCaMK:2 known_CCaMK seen 2 times already, renaming to known_CCaMK:3 known_CCaMK seen 3 times already, renaming to known_CCaMK:4 known_CCaMK seen 4 times already, renaming to known_CCaMK:5 known_CCaMK seen 5 times already, renaming to known_CCaMK:6 known_CCaMK seen 6 times already, renaming to known_CCaMK:7 known_CCaMK seen 7 times already, renaming to known_CCaMK:8 known_CCaMK seen 8 times already, renaming to known_CCaMK:9 known_CCaMK seen 9 times already, renaming to known_CCaMK:10 known_CCaMK seen 10 times already, renaming to known_CCaMK:11 known_CCaMK seen 11 times already, renaming to known_CCaMK:12 known_CCaMK seen 12 times already, renaming to known_CCaMK:13 known_CCaMK seen 13 times already, renaming to known_CCaMK:14 known_CCaMK seen 14 times already, renaming to known_CCaMK:15 known_CCaMK seen 15 times already, renaming to known_CCaMK:16 known_Nsp1 seen 1 times already, renaming to known_Nsp1:2 known_Nsp1 seen 2 times already, renaming to known_Nsp1:3 known_Nsp1 seen 3 times already, renaming to known_Nsp1:4 known_Har1 seen 1 times already, renaming to known_Har1:2 known_Har1 seen 2 times already, renaming to known_Har1:3 known_Har1 seen 3 times already, renaming to known_Har1:4 known_Har1 seen 4 times already, renaming to known_Har1:5 known_Har1 seen 5 times already, renaming to known_Har1:6 known_Sen1 seen 1 times already, renaming to known_Sen1:2 known_Sen1 seen 2 times already, renaming to known_Sen1:3 known_Sen1 seen 3 times already, renaming to known_Sen1:4 known_Sen1 seen 4 times already, renaming to known_Sen1:5 known_Nap seen 1 times already, renaming to known_Nap:2 known_Nap seen 2 times already, renaming to known_Nap:3 known_Nap seen 3 times already, renaming to known_Nap:4 known_Nap seen 4 times already, renaming to known_Nap:5 known_Nap seen 5 times already, renaming to known_Nap:6 known_Nap seen 6 times already, renaming to known_Nap:7 known_Nap seen 7 times already, renaming to known_Nap:8 known_Nap seen 8 times already, renaming to known_Nap:9 known_Nap seen 9 times already, renaming to known_Nap:10 known_Nap seen 10 times already, renaming to known_Nap:11 known_Nap seen 11 times already, renaming to known_Nap:12 known_Nap seen 12 times already, renaming to known_Nap:13 known_Nap seen 13 times already, renaming to known_Nap:14 known_Nap seen 14 times already, renaming to known_Nap:15 known_Nap seen 15 times already, renaming to known_Nap:16 known_Nap seen 16 times already, renaming to known_Nap:17 known_Nap seen 17 times already, renaming to known_Nap:18 known_Nap seen 18 times already, renaming to known_Nap:19 known_Nap seen 19 times already, renaming to known_Nap:20 known_Nap seen 20 times already, renaming to known_Nap:21 known_Nap seen 21 times already, renaming to known_Nap:22 known_Nap seen 22 times already, renaming to known_Nap:23 known_Nap seen 23 times already, renaming to known_Nap:24 known_Nap seen 24 times already, renaming to known_Nap:25 known_Nap seen 25 times already, renaming to known_Nap:26 known_Nap seen 26 times already, renaming to known_Nap:27 known_Nap seen 27 times already, renaming to known_Nap:28 known_Nap seen 28 times already, renaming to known_Nap:29 known_Nap seen 29 times already, renaming to known_Nap:30 known_Nap seen 30 times already, renaming to known_Nap:31 known_Nap seen 31 times already, renaming to known_Nap:32 known_Nap seen 32 times already, renaming to known_Nap:33 known_Nap seen 33 times already, renaming to known_Nap:34 known_Nap seen 34 times already, renaming to known_Nap:35 known_Nap seen 35 times already, renaming to known_Nap:36 known_Nap seen 36 times already, renaming to known_Nap:37 known_Nap seen 37 times already, renaming to known_Nap:38 known_Nap seen 38 times already, renaming to known_Nap:39 known_Nap seen 39 times already, renaming to known_Nap:40 known_Nap seen 40 times already, renaming to known_Nap:41 known_Nap seen 41 times already, renaming to known_Nap:42 known_Nap seen 42 times already, renaming to known_Nap:43 known_Nap seen 43 times already, renaming to known_Nap:44 known_Nap seen 44 times already, renaming to known_Nap:45 known_Nap seen 45 times already, renaming to known_Nap:46 known_Nap seen 46 times already, renaming to known_Nap:47 known_Nap seen 47 times already, renaming to known_Nap:48 known_Nap seen 48 times already, renaming to known_Nap:49 known_LjHK1 seen 1 times already, renaming to known_LjHK1:2 known_LjHK1 seen 2 times already, renaming to known_LjHK1:3 known_LjHK1 seen 3 times already, renaming to known_LjHK1:4 known_LjHK1 seen 4 times already, renaming to known_LjHK1:5 known_LjHK1 seen 5 times already, renaming to known_LjHK1:6 known_LjHK1 seen 6 times already, renaming to known_LjHK1:7 known_LjHK1 seen 7 times already, renaming to known_LjHK1:8 known_LjHK1 seen 8 times already, renaming to known_LjHK1:9 known_LjHK1 seen 9 times already, renaming to known_LjHK1:10 known_LjHK1 seen 10 times already, renaming to known_LjHK1:11 known_LjHK1 seen 11 times already, renaming to known_LjHK1:12 known_LjHK1 seen 12 times already, renaming to known_LjHK1:13 known_LjHK1 seen 13 times already, renaming to known_LjHK1:14 known_LjHK1 seen 14 times already, renaming to known_LjHK1:15 known_LjHK1 seen 15 times already, renaming to known_LjHK1:16 known_LjHK1 seen 16 times already, renaming to known_LjHK1:17 known_LjHK1 seen 17 times already, renaming to known_LjHK1:18 known_LjHK1 seen 18 times already, renaming to known_LjHK1:19 known_LjHK1 seen 19 times already, renaming to known_LjHK1:20 known_LjHK1 seen 20 times already, renaming to known_LjHK1:21 known_LjHK1 seen 21 times already, renaming to known_LjHK1:22 known_LjHK1 seen 22 times already, renaming to known_LjHK1:23 known_LjHK1 seen 23 times already, renaming to known_LjHK1:24 known_Cerberus seen 1 times already, renaming to known_Cerberus:2 known_Cerberus seen 2 times already, renaming to known_Cerberus:3 known_Cerberus seen 3 times already, renaming to known_Cerberus:4 known_Cerberus seen 4 times already, renaming to known_Cerberus:5 known_Cerberus seen 5 times already, renaming to known_Cerberus:6 known_Cerberus seen 6 times already, renaming to known_Cerberus:7 known_Cerberus seen 7 times already, renaming to known_Cerberus:8 known_Cerberus seen 8 times already, renaming to known_Cerberus:9 known_Cerberus seen 9 times already, renaming to known_Cerberus:10 known_Cerberus seen 10 times already, renaming to known_Cerberus:11 known_Cerberus seen 11 times already, renaming to known_Cerberus:12 known_Cerberus seen 12 times already, renaming to known_Cerberus:13 known_Cerberus seen 13 times already, renaming to known_Cerberus:14 known_Cerberus seen 14 times already, renaming to known_Cerberus:15 known_Cerberus seen 15 times already, renaming to known_Cerberus:16 known_Cerberus seen 16 times already, renaming to known_Cerberus:17 known_Cerberus seen 17 times already, renaming to known_Cerberus:18 known_Cerberus seen 18 times already, renaming to known_Cerberus:19 known_Cerberus seen 19 times already, renaming to known_Cerberus:20 known_Cerberus seen 20 times already, renaming to known_Cerberus:21 known_Cerberus seen 21 times already, renaming to known_Cerberus:22 known_Cerberus seen 22 times already, renaming to known_Cerberus:23 known_Cerberus seen 23 times already, renaming to known_Cerberus:24 known_Cerberus seen 24 times already, renaming to known_Cerberus:25 known_Cerberus seen 25 times already, renaming to known_Cerberus:26 known_Cerberus seen 26 times already, renaming to known_Cerberus:27 known_Cerberus seen 27 times already, renaming to known_Cerberus:28 known_Cerberus seen 28 times already, renaming to known_Cerberus:29 known_Cerberus seen 29 times already, renaming to known_Cerberus:30 known_Cerberus seen 30 times already, renaming to known_Cerberus:31 known_Cerberus seen 31 times already, renaming to known_Cerberus:32 known_Cerberus seen 32 times already, renaming to known_Cerberus:33 known_Cerberus seen 33 times already, renaming to known_Cerberus:34 known_Cerberus seen 34 times already, renaming to known_Cerberus:35 known_Astray seen 1 times already, renaming to known_Astray:2 known_Astray seen 2 times already, renaming to known_Astray:3 known_Astray seen 3 times already, renaming to known_Astray:4 known_Astray seen 4 times already, renaming to known_Astray:5 known_Astray seen 5 times already, renaming to known_Astray:6 known_Astray seen 6 times already, renaming to known_Astray:7 known_Astray seen 7 times already, renaming to known_Astray:8 known_Astray seen 8 times already, renaming to known_Astray:9 known_Astray seen 9 times already, renaming to known_Astray:10 known_Astray seen 10 times already, renaming to known_Astray:11 known_Astray seen 11 times already, renaming to known_Astray:12 known_Astray seen 12 times already, renaming to known_Astray:13 known_Astray seen 13 times already, renaming to known_Astray:14 known_Astray seen 14 times already, renaming to known_Astray:15 known_Astray seen 15 times already, renaming to known_Astray:16 known_Pollux seen 1 times already, renaming to known_Pollux:2 known_Pollux seen 2 times already, renaming to known_Pollux:3 known_Pollux seen 3 times already, renaming to known_Pollux:4 known_Pollux seen 4 times already, renaming to known_Pollux:5 known_Pollux seen 5 times already, renaming to known_Pollux:6 known_Pollux seen 6 times already, renaming to known_Pollux:7 known_Pollux seen 7 times already, renaming to known_Pollux:8 known_Pollux seen 8 times already, renaming to known_Pollux:9 known_Pollux seen 9 times already, renaming to known_Pollux:10 known_Pollux seen 10 times already, renaming to known_Pollux:11 known_Pollux seen 11 times already, renaming to known_Pollux:12 known_Pollux seen 12 times already, renaming to known_Pollux:13 known_Pollux seen 13 times already, renaming to known_Pollux:14 known_Pollux seen 14 times already, renaming to known_Pollux:15 known_Pollux seen 15 times already, renaming to known_Pollux:16 known_Pollux seen 16 times already, renaming to known_Pollux:17 known_Pollux seen 17 times already, renaming to known_Pollux:18 known_Pollux seen 18 times already, renaming to known_Pollux:19 known_Pollux seen 19 times already, renaming to known_Pollux:20 known_Pollux seen 20 times already, renaming to known_Pollux:21 known_Pollux seen 21 times already, renaming to known_Pollux:22 known_Pollux seen 22 times already, renaming to known_Pollux:23 known_Pollux seen 23 times already, renaming to known_Pollux:24 known_Pollux seen 24 times already, renaming to known_Pollux:25 known_Pollux seen 25 times already, renaming to known_Pollux:26 known_Pollux seen 26 times already, renaming to known_Pollux:27 - 2023-03-05 adf: change gene_model_main column one names to conform to genome_main: s/^lotja.MG20.gnm3.Ljchloro/lotja.MG20.gnm3.LjC/ s/^lotja.MG20.gnm3.Ljmito/lotja.MG20.gnm3.LjM/ -2023-10-10 adf: partition genes not appearing in proteins fasta into separate low quality file. add AHRD annotations for the remaining genes. Part of fixes for https://github.com/legumeinfo/datastore-issues/issues/168