---
identifier: Wm82.gnm1.mrk.Li_Guo_2016

genotyping_platform: Li_Guo_2016

scientific_name: Glycine max

taxid: 3847

scientific_name_abbrev: glyma

genotype:
  - Williams 82

synopsis: "59,845 single-nucleotide polymorphisms identified from re-sequencing of 279 accessions from Yangtze-Huai soybean breeding germplasm."

description: "To discover genes or QTLs underlying naturally occurring variations in soybean P.sojae resistance, we performed a genome-wide association study using 59,845 single-nucleotide polymorphisms identified from re-sequencing of 279 accessions from Yangtze-Huai soybean breeding germplasm. We used two models for association analysis. The same strong peak was detected by both two models on chromosome 13. Within the 500-kb flanking regions, three candidate genes (Glyma13g32980, Glyma13g33900, Glyma13g33512) had SNPs in their exon regions."

publication_doi: 10.1007/s00438-015-1164-x

publication_title: "Loci and candidate gene identification for resistance to Phytophthora sojae via association analysis in soybean [Glycine max (L.) Merr.]"

contributors: "Lihong Li, Na Guo, Jingping Niu, Zili Wang, Xiaoxia Cui, Jutao Sun, Tuanjie Zhao, Han Xing"

citation: "Li, L. et al. Loci and candidate gene identification for resistance to Phytophthora sojae via association analysis in soybean [Glycine max (L.) Merr]. Mol. Genet. Genomics 291, 1095–1103 (2016)"

data_curators: Sam Hokin

public_access_level: public

license: Open