--- - name: glyma.Wm82.gnm6.ann1.PKSW.annotation_info.txt.gz description: Table of gene annotations prior_names: - Gmax_880_Wm82.a6.v1.annotation_info.txt.gz - name: glyma.Wm82.gnm6.ann1.PKSW.cds_primary.fna.gz description: CDS sequences - primary only prior_names: - Gmax_880_Wm82.a6.v1.cds_primaryTranscriptOnly.fa.gz - name: glyma.Wm82.gnm6.ann1.PKSW.cds.fna.gz description: CDS sequences applications: - blast - mines prior_names: - Gmax_880_Wm82.a6.v1.cds.fa.gz - name: glyma.Wm82.gnm6.ann1.PKSW.defline.txt.gz description: Defline for genes prior_names: - Gmax_880_Wm82.a6.v1.defline.txt.gz - name: glyma.Wm82.gnm6.ann1.PKSW.featid_map.tsv.gz description: Hash file of old/new gene IDs - name: glyma.Wm82.gnm6.ann1.PKSW.gene_models_exons.gff3.gz description: Gene models, with exon features applications: - mines prior_names: - Gmax_880_Wm82.a6.v1.gene_exons_strip.gff3.gz - name: glyma.Wm82.gnm6.ann1.PKSW.gene_models_main.bed.gz description: BED-format file, derived from gene_models_main.gff3 prior_names: - Gmax_880_Wm82.a6.v1.gene_strip.gff3.gz - name: glyma.Wm82.gnm6.ann1.PKSW.gene_models_main.gff3.gz description: Gene models - main applications: - mines - jbrowse prior_names: - Gmax_880_Wm82.a6.v1.gene_strip.gff3.gz - name: glyma.Wm82.gnm6.ann1.PKSW.iprscan.gff3.gz description: InterPro functional information for genes (gff format) - name: glyma.Wm82.gnm6.ann1.PKSW.legfed_v1_0.M65K.gfa.tsv.gz description: gene family assignments - name: glyma.Wm82.gnm6.ann1.PKSW.locus_transcript_name_map.txt.gz description: Table of gene ID correspondences among Wm82 assemblies prior_names: - Gmax_880_Wm82.a6.v1.locus_transcript_name_map.txt.gz - name: glyma.Wm82.gnm6.ann1.PKSW.mrna_primary.fna.gz description: Transcript sequences - primary only prior_names: - Gmax_880_Wm82.a6.v1.transcript_primaryTranscriptOnly.fa.gz - name: glyma.Wm82.gnm6.ann1.PKSW.mrna.fna.gz description: mrna.fna.gz applications: - mines prior_names: - Gmax_880_Wm82.a6.v1.transcript.fa.gz - name: glyma.Wm82.gnm6.ann1.PKSW.protein_primary.faa.gz description: Protein sequences - primary only prior_names: - Gmax_880_Wm82.a6.v1.protein_primaryTranscriptOnly.fa.gz - name: glyma.Wm82.gnm6.ann1.PKSW.protein.faa.gz description: Protein sequences applications: - blast - mines prior_names: - Gmax_880_Wm82.a6.v1.protein.fa.gz - name: glyma.Wm82.gnm6.ann1.PKSW.repeatmasked_assembly.gff3.gz description: Repeat-masking coordinates prior_names: - Gmax_880_Wm82.a6.v1.repeatmasked_assembly_v2.0.gff3.gz