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# filename in this repository: description
glyfa.G1718.gnm1.ann1.2KSV.cds.fna.gz: coding sequences
glyfa.G1718.gnm1.ann1.2KSV.gene_models_main.gff3.gz: GFF, derived from CDS sequences mapped onto genome with gmap. Note: this file lacks UTR features. See those in the gene_models_orig_patched.gff3 file.
glyfa.G1718.gnm1.ann1.2KSV.gene_models_orig_patched.gff3.gz: Derived from the original MAKER and GeMoMa-based GFF, with parent-child relationships for GeMoMa genes repaired using the AGAT GFF toolkit.
glyfa.G1718.gnm1.ann1.2KSV.protein.faa.gz: Protein sequences, derived using gffread and the files Gfa.cds and Gfa_G1718_chr.fsa
glyfa.G1718.gnm1.ann1.2KSV.mrna.fna.gz: transcript sequences
glyfa.G1718.gnm1.ann1.2KSV.legfed_v1_0.M65K.gfa.tsv.gz: gene family assignments
glyfa.G1718.gnm1.ann1.2KSV.iprscan.gff3.gz: Interproscan results