--- # filename in this repository: descriptions cicar.CDCFrontier.gnm2.ann1.9M1L.cds_primary.fna.gz: Primary transcripts were selected as the longest transcript for each gene, coding sequences cicar.CDCFrontier.gnm2.ann1.9M1L.cds_primary.fna.gz.fai: samtools faidx indexed cicar.CDCFrontier.gnm2.ann1.9M1L.cds_primary.fna.gz.gzi: samtools faidx indexed cicar.CDCFrontier.gnm2.ann1.9M1L.cds.fna.gz: cds sequences cicar.CDCFrontier.gnm2.ann1.9M1L.cds.fna.gz.fai: samtools faidx indexed cicar.CDCFrontier.gnm2.ann1.9M1L.cds.fna.gz.gzi: samtools faidx indexed cicar.CDCFrontier.gnm2.ann1.9M1L.gene_models_main.gff3.gz: GFF3 of all mRNA sequences (UTR, CDS, EXON) with AHRD functional annotations cicar.CDCFrontier.gnm2.ann1.9M1L.gene_models_main.gff3.gz.tbi: tabix indexed cicar.CDCFrontier.gnm2.ann1.9M1L.protein_primary.faa.gz: Primary transcripts were selected as the longest transcript for each gene, amino acid sequences cicar.CDCFrontier.gnm2.ann1.9M1L.protein_primary.faa.gz.fai: tabix indexed cicar.CDCFrontier.gnm2.ann1.9M1L.protein_primary.faa.gz.gz: tabix indexed cicar.CDCFrontier.gnm2.ann1.9M1L.protein.faa.gz: amino acid sequences cicar.CDCFrontier.gnm2.ann1.9M1L.protein.faa.gz.fai: samtools faidx indexed cicar.CDCFrontier.gnm2.ann1.9M1L.protein.faa.gz.gzi: samtools faidx indexed cicar.CDCFrontier.gnm2.ann1.9M1L.iprscan.gff3.gz: GFF3 of Interproscan cicar.CDCFrontier.gnm2.ann1.9M1L.iprscan.gff3.gz.tbi: tabix indexed cicar.CDCFrontier.gnm2.ann1.9M1L.legfed_v1_0.M65K.gfa.tsv.gz: Gene family assignments cicar.CDCFrontier.gnm2.ann1.9M1L.cds.bed.gz: BED-format gene coordinates