---
file_transformation:
  -   cat QANZ01.1.fsa_nt | perl -pe 's/^>(\S+) .+ (scaffold\d+_cov\d+), .+/>chafa.NM87.gnm1.$2 $1/'

changes:
  - 2019-11-27: Initial repository creation
  - 2022-01-21: SCannon - Duplicate cds.fna file as mrna.fna file. Given the GFF structure, these should be the same (no splice variants, no UTRs)
    cp chafa.MN87.gnm1.ann1.LWFM.cds.fna.gz chafa.MN87.gnm1.ann1.LWFM.mrna.fna.gz

  - 2024-11-26 sc: add Name attribute to FILE.gene_models_main.gff3
  - 2025-04-16 adf: add chafa.MN87.gnm1.ann1.LWFM.legume.fam3.VLMQ.gfa.tsv.gz