--- - name: chafa.ISC494698.gnm1.ann1.G7XW.annotation_info.txt.gz description: Table of gene annotations prior_names: - Cfasciculatavar_ISC494698HAP1_854_v1.1.annotation_info.txt.gz - name: chafa.ISC494698.gnm1.ann1.G7XW.cds_primary.fna.gz description: CDS sequences - primary only - name: chafa.ISC494698.gnm1.ann1.G7XW.cds.fna.gz description: CDS sequences applications: - blast - mines - name: chafa.ISC494698.gnm1.ann1.G7XW.defline.txt.gz description: Defline for genes prior_names: - Cfasciculatavar_ISC494698HAP1_854_v1.1.defline.txt.gz - name: chafa.ISC494698.gnm1.ann1.G7XW.featid_map.tsv.gz description: Hash file of old/new gene IDs - name: chafa.ISC494698.gnm1.ann1.G7XW.gene_models_exons.gff3.gz description: Gene models, with exon features applications: - mines - name: chafa.ISC494698.gnm1.ann1.G7XW.gene_models_main.bed.gz description: BED-format file, derived from gene_models_main.gff3 - name: chafa.ISC494698.gnm1.ann1.G7XW.gene_models_main.gff3.gz description: Gene models - main applications: - mines - jbrowse-index - name: chafa.ISC494698.gnm1.ann1.G7XW.iprscan.gff3.gz description: InterPro functional information for genes (gff format) - name: chafa.ISC494698.gnm1.ann1.G7XW.legfed_v1_0.M65K.gfa.tsv.gz description: gene family assignments - name: chafa.ISC494698.gnm1.ann1.G7XW.mrna_primary.fna.gz description: Transcript sequences - primary only - name: chafa.ISC494698.gnm1.ann1.G7XW.mrna.fna.gz description: Transcript sequences applications: - mines - name: chafa.ISC494698.gnm1.ann1.G7XW.protein_primary.faa.gz description: Protein sequences - primary only - name: chafa.ISC494698.gnm1.ann1.G7XW.protein.faa.gz description: Protein sequences applications: - blast - mines - name: chafa.ISC494698.gnm1.ann1.G7XW.repeatmasked_assembly.gff.gz description: Repeat-masking coordinates prior_names: - Cfasciculatavar_ISC494698HAP1_854_v1.1.repeatmasked_assembly_v1.0.gff3.gz