identifier: Huayu28_x_P76.qtl.Hu_Zhang_2018

genetic_map: Huayu28_x_P76.Hu_Zhang_2018

synopsis: "A genetic map from a Huayu28 x P76 RIL population composed of 2,334 markers (2,266 SNPs and 68 microsatellites) for the study of seed oleic and linoleic acid content"

scientific_name: Arachis hypogaea

taxid: 3818

scientific_name_abbrev: arahy

genotype:
  - Huayu28 x P76

description: "A mapping population of 146 F2:11 recombinant inbred lines (RILs) was produced A1:P2 a cross of the cultivated peanut (Arachis hypogaea L.) maternal inbred line 'Huayu28' and paternal inbred line 'P76'.  The high-resolution genetic linkage map is composed of 2,334 markers (2,266 SNPs and 68 microsatellites) placed upon 20 linkage groups.  The total length of the map is 2,586.37 cM; lengths of linkage groups range from 68.79 to 191.24 cM. This high-density map is the first to be developed in cultivated peanut incorporating de novo polymorphic SNP markers discovered using a SLAF-seq (Specific Length Amplified Fragment Sequencing) methodology.  The authors first developed 433,679 high-quality SLAFs and then discovered that 29,075 of these SNP markers were polymorphic.  There were 7,949 polymorphic markers that followed an aa_x_bb segregation pattern appropriate for linkage analysis, out of which 2,266 SNPs were linked together in the final map. QTLs associated with seed oleic and linoleic acid content were found."

publication_doi: 10.1038/s41598-018-23873-7

publication_title: "High-Density Genetic Map Construction and Identification of QTLs Controlling Oleic and Linoleic Acid in Peanut using SLAF-seq and SSRs"

contributors: "Hu, X H; Zhang, S Z; Miao, H R; Cui, F G; Shen, Y; Yang, W Q; Xu, T T; Chen, N; Chi, X Y; Zhang, Z M; Chen, J"

data_curators: Sam Hokin

public_access_level: public

license: Open

citation: "Hu, X. H. et al. High-Density Genetic Map Construction and Identification of QTLs Controlling Oleic and Linoleic Acid in Peanut using SLAF-seq and SSRs. Sci. Rep. 8, 5479 (2018)"