---
# filename in this repository: description
arahy.Tifrunner.gnm1.KYV3.genome_main.fna: Main genome assembly, consisting of pseudomolecules plus remaining unplaced scaffolds
arahy.Tifrunner.gnm1.KYV3.rDNA.fna: ribosomal DNA assemblies
arahy.Tifrunner.gnm1.KYV3.repeat.fna: repeat-dense scaffolds, excluded from the main assembly
arahy.Tifrunner.gnm1.KYV3.genome_assignment.txt: Ancestral genome assignment of A. hypogaea. Method section describing the creation of this file (Supplementary Data 2) is "Inferring genetic exchange between subgenomes".
arahy.Tifrunner.gnm1.KYV3.genome_softmasked.fna: Main genome assembly, soft-masked for repeats.
arahy.Tifrunner.gnm1.KYV3.genome_repeatmask_coords.gff: Coordinates for masking main genome assembly.