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# filename in this repository: description
arahy.Tifrunner.gnm2.ann1.4K0L.cds_primary.fna: coding sequence: longest splice variant per gene
arahy.Tifrunner.gnm2.ann1.4K0L.gene_models_main.gff3: gene models from gnm1.ann1, mapped into gnm2
arahy.Tifrunner.gnm2.ann1.4K0L.info_descriptors.txt: functional descriptions, derived from gene_models_main.gff3; carried over from gnm1.ann1
arahy.Tifrunner.gnm2.ann1.4K0L.info_fwd_chain.txt: chain-file, derived from MUMmer, used with CrossMap to project gene models into gnm2; forward-forward models
arahy.Tifrunner.gnm2.ann1.4K0L.info_rev_chain.txt: chain-file, derived from MUMmer, used with CrossMap to project gene models into gnm2; forward-forward models
arahy.Tifrunner.gnm2.ann1.4K0L.info_unmapped_models.txt: gene models that were not mapped from gnm1 to gnm2
arahy.Tifrunner.gnm2.ann1.4K0L.protein.faa: protein sequence
arahy.Tifrunner.gnm2.ann1.4K0L.protein_primary.faa: protein sequence: longest splice variant per gene
arahy.Tifrunner.gnm2.ann1.4K0L.mrna.fna: transcript sequence
arahy.Tifrunner.gnm2.ann1.4K0L.mrna_primary.fna: transcript sequence: longest splice variant per gene
arahy.Tifrunner.gnm2.ann1.4K0L.legfed_v1_0.M65K.gfa.tsv.gz: Gene family assignments